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BaseInfo

ncRNA ID	novel_gar_miR1672
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr1:2810363-2810489 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180720
Length	24
Mature sequence(if miRNA)	104 - AAUGAUAUUAUAAGGAUAAAGGGA - 127
Stem-loop(if miRNA)	--      CU                    C    U       -  CUAUU      --UU   G   CCUUUA  UUUAUAAUAUCAUUACUUAA UCAA UAGUUAA CA     ACUAUU    AUC G   ||||||  |||||||||||||||||||| |||| ||||||| ||     ||||||    ||| A   GGAAAU  GAAUAUUAUAGUAAUGAAUU AGUU AUUAAUU GU     UGAUAA    UAG A AG      AG                    A    U       A  -ACAU      CGAU   U
Stem-loop sequence	CCUUUACUUUUAUAAUAUCAUUACUUAACUCAAUUAGUUAACACUAUUACUAUUUUAUCGGAAUGAUUAGCAAUAGUUACAUGAUUAAUUAUUUGAAUUAAGUAAUGAUAUUAUAAGGAUAAAGGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017783554.1	ncRNA:24   AGGGAAAUAGGAAUAUUAUAGUAA   1   ||=|||||||=||||||||||||* targets:815   UCUCUUUAUCUUUAUAAUAUCAUC   838 Target Full Sequence	2.0	PREDICTED: Gossypium arboreum probable signal peptidase complex subunit 2 (LOC108480525), transcript variant X2, mRNA	probable signal peptidase complex subunit 2(LOC108480525)	coding protein	psRNATarget
XM_017783555.1	ncRNA:24   AGGGAAAUAGGAAUAUUAUAGUAA   1   ||=|||||||=||||||||||||* targets:809   UCUCUUUAUCUUUAUAAUAUCAUC   832 Target Full Sequence	2.0	PREDICTED: Gossypium arboreum probable signal peptidase complex subunit 2 (LOC108480525), transcript variant X3, mRNA	probable signal peptidase complex subunit 2(LOC108480525)	coding protein	psRNATarget
XM_017772268.1	ncRNA:24   AGGGAAAUAGGAAUAUUAUAGUAA   1   ||||||||*==||||||||||||| targets:1097   UCCCUUUACUUUUAUAAUAUCAUU   1120 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum uncharacterized LOC108470793 (LOC108470793), mRNA	uncharacterized LOC108470793(LOC108470793)	coding protein	psRNATarget