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BaseInfo

ncRNA ID novel_gar_miR1670
Species Gossypium arboreum
Class miRNA
Genome position Chr1:31841269-31841318 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 1 - AUUUGAGUUUAUGUUGGAUUGGGU - 24
Stem-loop(if miRNA) -- UG G        -UA      U
  U  G UUAAUAUA   UUAGAU G
  |  | ||||||||   |||||| G
  G  U GGUUGUAU   AGUUUA G
UG GU A        UUG      U
Stem-loop sequence UUGGGUUAAUAUAUAUUAGAUUGGGUAUUUGAGUUUAUGUUGGAUUGGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017779432.1
ncRNA:24   UGGGUUAGGUUGUAUUUGAGUUUA   1
  ===*=||=||||||||=|||||||
targets:1369   GUUGGAUUCAACAUAAGCUCAAAU   1392

2.5 PREDICTED: Gossypium arboreum uncharacterized LOC108477022 (LOC108477022), mRNA uncharacterized LOC108477022(LOC108477022) coding protein psRNATarget