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BaseInfo

ncRNA ID	novel_gar_miR1669
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr10:20553584-20553649 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180720;SRR1029587
Length	21
Mature sequence(if miRNA)	1 - AUUGAGUGCAGCGUUGAUGAA - 21
Stem-loop(if miRNA)	--      U              -AUU     A   AUUGAG GCAGCGUUGAUGAA    UCUCA U   |||||| ||||||||||||||    ||||| U   UAACUC CGUCGCGACUGCUU    AGAGU U AC      U              AAGU     C
Stem-loop sequence	AUUGAGUGCAGCGUUGAUGAAAUUUCUCAAUUUCUGAGAUGAAUUCGUCAGCGCUGCUCUCAAUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017763025.1	ncRNA:21   AAGUAGUUGCGACGUGAGUUA   1   *|=|||||||||||||||||| targets:712   AUUAUCAACGCUGCACUCAAU   732 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum laccase-11-like (LOC108463086), mRNA	laccase-11-like(LOC108463086)	coding protein	psRNATarget
XM_017783783.1	ncRNA:21   AAGUAGUUGCGACGUGAGUUA   1   *|*|||||||||||||||||| targets:769   CUAAUCAACGCUGCACUCAAU   789 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum laccase-4-like (LOC108480706), mRNA	laccase-4-like(LOC108480706)	coding protein	psRNATarget
XM_017763384.1	ncRNA:21   AAGUAGUUGCGACGUGAGUUA   1   *|||||||=|||||||||||| targets:667   AUCAUCAAUGCUGCACUCAAU   687 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum laccase-7-like (LOC108463446), mRNA	laccase-7-like(LOC108463446)	coding protein	psRNATarget
XM_017792744.1	ncRNA:21   AAGUAGUUGCGACGUGAGUUA   1   *||||||||||||||||*||| targets:675   AUCAUCAACGCUGCACUGAAU   695 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum laccase-4 (LOC108488467), mRNA	laccase-4(LOC108488467)	coding protein	psRNATarget
XM_017783901.1	ncRNA:21   AAGUAGUUGCGACGUGAGUUA   1   *||||||||||||||||*||| targets:743   AUCAUCAACGCUGCACUGAAU   763 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum laccase-4-like (LOC108480798), mRNA	laccase-4-like(LOC108480798)	coding protein	psRNATarget
XM_017789385.1	ncRNA:21   AAGUAGUUGCGACGUGAGUUA   1   ||*|||||=|||||||||||| targets:798   UUAAUCAAUGCUGCACUCAAU   818 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum laccase-2 (LOC108485533), mRNA	laccase-2(LOC108485533)	coding protein	psRNATarget
XM_017762807.1	ncRNA:21   AAGUAGUUGCGACGUGAGUUA   1   *|||||||=|||||||||||* targets:706   AUCAUCAAUGCUGCACUCAAC   726 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum laccase-11-like (LOC108462895), mRNA	laccase-11-like(LOC108462895)	coding protein	psRNATarget
XM_017759299.1	ncRNA:21   AAGUAGUUGCGACGUGAGUUA   1   *|=||||||||||||*||||| targets:667   AUUAUCAACGCUGCAGUCAAU   687 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum laccase-7-like (LOC108459898), mRNA	laccase-7-like(LOC108459898)	coding protein	psRNATarget
XM_017759510.1	ncRNA:21   AAGUAGUUGCGACGUGAGUUA   1   *||||||*||||*|||||||| targets:215   AUCAUCACCGCUUCACUCAAU   235 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized LOC108460142 (LOC108460142), mRNA	uncharacterized LOC108460142(LOC108460142)	coding protein	psRNATarget