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BaseInfo

ncRNA ID novel_gar_miR1668
Species Gossypium arboreum
Class miRNA
Genome position Chr13:66374654-66374820 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 144 - AUCAUACUUUAACGGAACUCAAGU - 167
Stem-loop(if miRNA) --        UA     A        CA          UGC                     -------       U  A      U
  UUGAGUUC  UUAAG UAUGAUGA  UGAUACUUUA   UUAUGUCACGUUAUCACUUAA       AUUUUUU UA AAAAUA U
  ||||||||  ||||| ||||||||  ||||||||||   |||||||||||||||||||||       ||||||| || ||||||
  AACUCAAG  AAUUU AUACUACU  ACUGUGAGAU   AAUACGGUGUAAUAGUGAAUU       UAAAAAA AU UUUUAU U
UG        GC     C        AC          UUC                     UUUAAAU       U  A      U
Stem-loop sequence UUGAGUUCUAUUAAGAUAUGAUGACAUGAUACUUUAUGCUUAUGUCACGUUAUCACUUAAAUUUUUUUUAAAAAAUAUUUUUAUUUUAUAUAAAAAAUUAAAUUUUUAAGUGAUAAUGUGGCAUAACUUUAGAGUGUCACAUCAUCAUACUUUAACGGAACUCAAGU