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BaseInfo

ncRNA ID	ath-miRf11106-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - UACUCGACCUGGUGGUCGAGUGG - NA
Stem-loop(if miRNA)	--U          GGU          -AUG   AGA  GGC   AAA  C        U GAGG   UACUCGACCU   GGUCGAGUGG    GGA   AU   UCC   GU ACUCGACC G ||||   ||||||||||   ||||||||||    |||   ||   |||   || |||||||| CUUC   AUGAGCUGGG   CCAGCUCACU    CCU   UA   AGG   UA UGAGCUGG G     UGU          GGU          GAAA   CGG  AGA   GUG  -        G
Stem-loop sequence	GAGGUUACUCGACCUGGUGGUCGAGUGGAUGGGAAGAAUGGCUCCAAAGUCACUCGACCUGGGGGUCGAGUAUGUGGGAAGAAUGGCUCCAAAGUCACUCGACCUGGGGGUCGAGUAUGUCUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183194.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   ||||||||||||||||||||||| targets:449   CCACUCGACCACCAGGUCGAGUA   471 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   |||||||||*||||||||||||| targets:808   CCACUCGACAACCAGGUCGAGUA   830 Target Full Sequence	1.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   ||||||||||*|||||||||||| targets:1104   CCACUCGACCCCCAGGUCGAGUA   1126 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF183042.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   ||||||||||||*|||||||||| targets:1526   CCACUCGACCACGAGGUCGAGUA   1548 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   |=||||||||*|||||||||||| targets:187   CUACUCGACCCCCAGGUCGAGUA   209 Target Full Sequence	1.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   ||||||||||||*|||||||||= targets:1150   CCACUCGACCACGAGGUCGAGUG   1172 Target Full Sequence	2.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT025674.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   *=|||||||||||||||||*||= targets:108   AUACUCGACCACCAGGUCGCGUG   130 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT012022.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   =|||||*||||*||||||||||| targets:34   UCACUCUACCAACAGGUCGAGUA   56 Target Full Sequence	2.5	Arabidopsis thaliana At2g10890 mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   =|||||*||||*||||||||||| targets:317   UCACUCUACCAACAGGUCGAGUA   339 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   =|||||*||||*||||||||||| targets:365   UCACUCUACCAACAGGUCGAGUA   387 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   =|||||*||||*||||||||||| targets:413   UCACUCUACCAACAGGUCGAGUA   435 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   =|||||*|||||||*|||||||| targets:656   UCACUCUACCACCAAGUCGAGUA   678 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   =|||||*||||*||||||||||| targets:692   UCACUCUACCAACAGGUCGAGUA   714 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   =|||||*||||*||||||||||| targets:740   UCACUCUACCAACAGGUCGAGUA   762 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   =|||||*||||*||||||||||| targets:788   UCACUCUACCAACAGGUCGAGUA   810 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   =|||||*||||*||||||||||| targets:692   UCACUCUACCAACAGGUCGAGUA   714 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   =|||||*||||*||||||||||| targets:740   UCACUCUACCAACAGGUCGAGUA   762 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   =|||||*||||*||||||||||| targets:788   UCACUCUACCAACAGGUCGAGUA   810 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   =|||||*|||||||*|||||||| targets:1031   UCACUCUACCACCAAGUCGAGUA   1053 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   ||||||*|||||*|||||||||| targets:44   CCACUCAACCACAAGGUCGAGUA   66 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   =|||||*||||*||||||||||| targets:145   UCACUCUACCAACAGGUCGAGUA   167 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   *=||||||||*|||||||||||= targets:136   AUACUCGACCCCCAGGUCGAGUG   158 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   GGUGAGCUGGUGGUCCAGCUCAU   1   *=||||||||*|||||||||||= targets:136   AUACUCGACCCCCAGGUCGAGUG   158 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget