| ncRNA ID | novel_gar_miR1649 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr1:75438591-75438677 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180720 |
| Length | 22 |
| Mature sequence(if miRNA) | 66 - UCUGCCUGGCUCCCUGGAUGCC - 87 |
| Stem-loop(if miRNA) |
-- C - G A U U UG A UCUGC UGGCUCC CUG AUGCCAACUA GGA GG GU AU A ||||| ||||||| ||| |||||||||| ||| || || || G GGACG ACUGAGG GAC UACGGUUGAU CCU CC CG UA G CU A A - - U - GU A |
| Stem-loop sequence | UCUGCCUGGCUCCCUGGAUGCCAACUAAGGAUGGUGUUGAUAAGGAAUUGGCCCUUCCUAGUUGGCAUCAGAGGAGUCAAGCAGGUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017788312.1 |
|
2.5 | PREDICTED: Gossypium arboreum auxin response factor 17-like (LOC108484503), transcript variant X2, mRNA | auxin response factor 17-like(LOC108484503) | coding protein | psRNATarget | |||||||||
| XM_017788311.1 |
|
2.5 | PREDICTED: Gossypium arboreum auxin response factor 17-like (LOC108484503), transcript variant X1, mRNA | auxin response factor 17-like(LOC108484503) | coding protein | psRNATarget |