ncRNA ID | ath-miRf11105-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - UGAAGUCACUCGACCUCGGGGUC - NA |
Stem-loop(if miRNA) |
------   G   GGA G                     A    AUGU  U AAG   U   G  CU ----         U       GGU AUG   U AAGUCACUCGACCUCGGGGUC AGUG    GG G   UAG GAU UC  C    UACUCGACC G       ||| |||   | ||||||||||||||||||||| ||||    || |   ||| ||| ||  |    |||||||||       CCA UAC   A UUUAGUGAGCUGGGGCUCCAG UCAU    CC C   GUU CUA AG  G    GUGAGCUGG G CCUGGA   G   --- G                     C    ----  U GAA   -   G  UU UCUA         G |
Stem-loop sequence | GGUGAUGGGAUGAAGUCACUCGACCUCGGGGUCAAGUGAUGUGGUGAAGUAGUGAUGUCCUCUACUCGACCUGGGGGUCGAGUGAUCUGUUGAGAUCUUGAAGCUCCUACUCGACCUCGGGGUCGAGUGAUUUGACAUGACCAGGUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183042.1 |
|
1.5 | Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
NM_103391.1 |
|
2.5 | Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA | DNAse I-like superfamily protein(AT1G40390) | coding protein | psRNATarget |