ncRNA ID | ath-miR5646 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr2:3517383-3517452 [-] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 20 |
Mature sequence(if miRNA) | 1 - GUUCGAGGCACGUUGGGAGG - 20 |
Stem-loop(if miRNA) |
CA  A      A   A   GC  A  ACUAA     C   UC CCAACG GCU UUG  CC AU     AUCUC G   || |||||| ||| |||  || ||     |||||   AG GGUUGC CGG AGC  GG UA     UGGAG U GG  -      A   -   UU  A  ----G     G |
Stem-loop sequence | CAUCACCAACGAGCUAUUGGCCCAAUACUAAAUCUCCGUGGAGGUGAUAGGUUCGAGGCACGUUGGGAGG |
1 | PMID:21940835
"High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis"; Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN; Genome Res. 22:163-176(2012). |