| ncRNA ID | novel_gar_miR1640 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr5:36769680-36769901 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029586 |
| Length | 24 |
| Mature sequence(if miRNA) | 199 - AUAUGUCCGGAUUCAUUUGGAUGG - 222 |
| Stem-loop(if miRNA) |
--AUA - GU A A GUA UUA - UUUU -UU A AU CAUCCUAAGACA UGUCCGGAUUCAUUUG GAUG UUUUCUAAAUUAU UAA GU AAAAAUA AAAAUUA AUUUU AAAAAAUU AU UGUAU AUG C |||||||||||||||| |||| ||||||||||||| ||| || ||||||| ||||||| ||||| |||||||| || ||||| ||| U ACAGGUCUAAGUAAGU CUAC AAAAGAUUUAAUA AUU CA UUUUUAU UUUUAAU UAAAA UUUUUUAA UA ACAUA UAC A GGUAA U UU C G -AA UAA A ---U CUU C GC AAAAUUAAGAUA |
| Stem-loop sequence | AUAUGUCCGGAUUCAUUUGGAUGGUUUUUCUAAAUUAUAUAAAGUGUAAAAAAUAUUAAAAAUUAAUUUUUUUUAAAAAAUUUUAUAUGUAUAUAUGCAUCCUAAGACACUAAUAGAAUUAAAACAUCGAUACACAUUUCAAUUUUUUUAAAAUAUAAUUUUAAUUAUUUUUAAACGUUACAUAAUUUAGAAAAUUCAUCUUGAAUGAAUCUGGACAAAUGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017757294.1 |
|
1.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108458055 (LOC108458055), mRNA | uncharacterized LOC108458055(LOC108458055) | coding protein | psRNATarget |