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BaseInfo

ncRNA ID novel_gar_miR1639
Species Gossypium arboreum
Class miRNA
Genome position Chr13:127947918-127948044 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 21
Mature sequence(if miRNA) 107 - UAGGGUCAGGACACUUUUAGC - 127
Stem-loop(if miRNA) --UA      -  A       AGC       ---------------------UA  GAAAAUAGUAAGAAAGCUC
    GGGUCA GG CACUUUU   AGGCUUU                       AU                   G
    |||||| || |||||||   |||||||                       ||                   C
    UCUAGU CC GUGAAAA   UCCGAAA                       CA                   U
GGGC      A  -       -AA       CUCACCACCGCCACCACCAUUAC  UUCUUUCAAGUAGGUUGAC
Stem-loop sequence UAGGGUCAGGACACUUUUAGCAGGCUUUUAAUGAAAAUAGUAAGAAAGCUCGCUCAGUUGGAUGAACUUUCUUACCAUUACCACCACCGCCACCACUCAAAGCCUAAAAAAGUGCCAUGAUCUCGGG