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BaseInfo

ncRNA ID	novel_gar_miR1635
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr13:129604066-129604156 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180720
Length	21
Mature sequence(if miRNA)	71 - UUGUCGGGACCCGAAAGAUGG - 91
Stem-loop(if miRNA)	--       -A     -      UAUAU         AGUUCUUAUU   AUCUUUC  GUUCC ACAGGU     AAUUUAGUU          C   |||||||  ||||| ||||||     |||||||||          U   UAGAAAG  CAGGG UGUUCA     UUGAAUUAA          G GG       CC     C      --CUU         CCCCUUACUA
Stem-loop sequence	AUCUUUCAGUUCCACAGGUUAUAUAAUUUAGUUAGUUCUUAUUCUGAUCAUUCCCCAAUUAAGUUUUCACUUGUCGGGACCCGAAAGAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017754704.1	ncRNA:21   GGUAGAAAGCCCAGGGCUGUU   1   ||||||||||||||||||||= targets:431   CCAUCUUUCGGGUCCCGACAG   451 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108456105 (LOC108456105), mRNA	uncharacterized LOC108456105(LOC108456105)	coding protein	psRNATarget
XM_017753786.1	ncRNA:21   GGUAGAAAGCCCAGGGCUGUU   1   ||||||||||||||||||||= targets:76   CCAUCUUUCGGGUCCCGACAG   96 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108455193 (LOC108455193), mRNA	uncharacterized LOC108455193(LOC108455193)	coding protein	psRNATarget
XM_017753783.1	ncRNA:21   GGUAGAAAGCCCAGGGCUGUU   1   ||||||||||||||||||||= targets:255   CCAUCUUUCGGGUCCCGACAG   275 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108455188 (LOC108455188), mRNA	uncharacterized LOC108455188(LOC108455188)	coding protein	psRNATarget
XM_017753778.1	ncRNA:21   GGUAGAAAGCCCAGGGCUGUU   1   ||||||||||||||||||||= targets:492   CCAUCUUUCGGGUCCCGACAG   512 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108455181 (LOC108455181), mRNA	uncharacterized LOC108455181(LOC108455181)	coding protein	psRNATarget
XM_017755196.1	ncRNA:21   GGUAGAAAGCCCAGGGCUGUU   1   ||||||||||||||||||||= targets:577   CCAUCUUUCGGGUCCCGACAG   597 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum protein TAR1-like (LOC108456633), mRNA	protein TAR1-like(LOC108456633)	coding protein	psRNATarget
XM_017753782.1	ncRNA:21   GGUAGAAAGCCCAGGGCUGUU   1   ||||||||||||||||||||= targets:789   CCAUCUUUCGGGUCCCGACAG   809 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108455185 (LOC108455185), mRNA	uncharacterized LOC108455185(LOC108455185)	coding protein	psRNATarget
XM_017774814.1	ncRNA:21   GGUAGAAAGCCCAGGGCUGUU   1   ||||||||||||||||||||= targets:765   CCAUCUUUCGGGUCCCGACAG   785 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108473314 (LOC108473314), mRNA	uncharacterized LOC108473314(LOC108473314)	coding protein	psRNATarget
XM_017753787.1	ncRNA:21   GGUAGAAAGCCCAGGGCUGUU   1   ||||||||||||||||||||= targets:789   CCAUCUUUCGGGUCCCGACAG   809 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108455194 (LOC108455194), mRNA	uncharacterized LOC108455194(LOC108455194)	coding protein	psRNATarget
XM_017753790.1	ncRNA:21   GGUAGAAAGCCCAGGGCUGUU   1   ||||||||||||||||||||= targets:546   CCAUCUUUCGGGUCCCGACAG   566 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108455200 (LOC108455200), mRNA	uncharacterized LOC108455200(LOC108455200)	coding protein	psRNATarget