ncRNA ID | novel_gar_miR1631 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr13:116710293-116710364 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 22 |
Mature sequence(if miRNA) | 51 - UUGACGUGGACAAAACGCUCCC - 72 |
Stem-loop(if miRNA) |
--    AU     -    A      -    -GUG   A   GAGC  UUUUG CCAC UCAGCA AAGU    UCC C   ||||  ||||| |||| |||||| ||||    |||   CUCG  AAAAC GGUG AGUUGU UUUA    AGG G CC    -C     A    C      G    GUGA   A |
Stem-loop sequence | GAGCAUUUUUGCCACAUCAGCAAAGUGUGUCCACGAGGAAGUGAUUUGUGUUGACGUGGACAAAACGCUCCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017784438.1 |
|
2.5 | PREDICTED: Gossypium arboreum serine/threonine-protein phosphatase 7 long form homolog (LOC108481281), mRNA | serine/threonine-protein phosphatase 7 long form homolog(LOC108481281) | coding protein | psRNATarget |