| ncRNA ID | novel_gar_miR1620 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr12:17598237-17598434 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180720 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AAUGAAUCUGAACAAAUUAAUGUC - 24 |
| Stem-loop(if miRNA) |
-- CU C U -------A U ---- A - ---- AAA UU UAU CAU AUUUGU UA AUUCAUUCUGAAU UUAAAUAUUUUU UAU GAUUUUUU UAAAU UUAUA UAUAUUA UAUUUUGA UUA A ||| |||||| || ||||||||||||| |||||||||||| ||| |||||||| ||||| ||||| ||||||| |||||||| ||| GUA UAAACA GU UAAGUAAGAUUUG AAUUUAUAAAAA AUA UUAAAAAA AUUUA AGUAU AUAUAAU AUAAAACU AAU C CU AU A C AAUAAAAA U UAAA A U AAAA --A UU UUU |
| Stem-loop sequence | CAUCUAUUUGUCUAUAUUCAUUCUGAAUAUUAAAUAUUUUUUUAUGAUUUUUUAUAAAUUUAUAUAUAUUAAAAUAUUUUGAUUUUAUAUACUUUUAAUUUCAAAAUAAUAAUAUAAAAAUAUGAUAUUUAAAAAAAAUUAAAUAUAUAAAAAUAUUUAAAAAAAUAAGUUUAGAAUGAAUCUGAACAAAUUAAUGUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017779266.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108476900 (LOC108476900), mRNA | uncharacterized LOC108476900(LOC108476900) | coding protein | psRNATarget | |||||||||
| XM_017794618.1 |
|
2.5 | PREDICTED: Gossypium arboreum phosphate transporter PHO1 homolog 3-like (LOC108489893), mRNA | phosphate transporter PHO1 homolog 3-like(LOC108489893) | coding protein | psRNATarget |