ncRNA ID | novel_gar_miR1618 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:24303360-24303488 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 21 |
Mature sequence(if miRNA) | 109 - GAAGGACUGGUUUGCUCUUUG - 129 |
Stem-loop(if miRNA) |
--          UG  U            -AU             ---UA   UUAAAACUGGCGUG   AAGAGCAAAU  GU CUUUUUGUUAAA   UUUUAUCUGUUUU     CUG              G   ||||||||||  || ||||||||||||   |||||||||||||     |||   UUCUCGUUUG  CA GGAAGACAAUUU   AAAGUAGGUAAAA     GAU              C GU          GU  -            AUU             CGGAA   CUUAUAAUCAGGGA |
Stem-loop sequence | AAGAGCAAAUUGGUUCUUUUUGUUAAAAUUUUUAUCUGUUUUUACUGUUAAAACUGGCGUGGCAGGGACUAAUAUUCUAGAAGGCAAAAUGGAUGAAAUUAUUUAACAGAAGGACUGGUUUGCUCUUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017789820.1 |
|
2.5 | PREDICTED: Gossypium arboreum transcription factor MYB36-like (LOC108485988), mRNA | transcription factor MYB36-like(LOC108485988) | coding protein | psRNATarget |