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BaseInfo

ncRNA ID novel_gar_miR1616
Species Gossypium arboreum
Class miRNA
Genome position Chr12:73100724-73100835 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 89 - AAUAGGAUUGUAUUGAGUGAACGU - 112
Stem-loop(if miRNA) --      -        -      -A  U     A  CCUAAAGUGACCCUAGUCGGA
  AAUAGG AUUGUAUU GAGUGA  CG GUGAC GC                     A
  |||||| |||||||| ||||||  || ||||| ||                     A
  UUAUUU UAACAUAA UUUAUU  GC CACUG AG                     G
UG      A        G      AA  -     -  CCAAAUCGCCAGGGCUUUGGC
Stem-loop sequence AAUAGGAUUGUAUUGAGUGAACGUGUGACAGCCCUAAAGUGACCCUAGUCGGAAAGCGGUUUCGGGACCGCUAAACCGAGUCACCGAAUUAUUUGAAUACAAUAUUUAUUGU