| ncRNA ID | novel_gar_miR1615 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr12:90135136-90135322 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180720;SRR3180721 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - AAUGACUAGUUUGCUCUUUGA - 21 |
| Stem-loop(if miRNA) |
-- A CUAUU U C AU AG - AAA U AC U U AAAGAGCAAACUGG CAUUU AAAAUUUCAUCCAUUUCU CUGUUAAAAA UG GU CUG AC UUAA CAU AG UACAUGUGA G |||||||||||||| ||||| |||||||||||||||||| |||||||||| || || ||| || |||| ||| || ||||||||| UUUCUCGUUUGAUC GUAAG UUUUAAGGUAGGUAAAGA GACAAUUUUU AC CA GAC UG AGUU GUG UC AUGUAUACU U AG A ACAAU U A -- GG A --C - -C C A |
| Stem-loop sequence | AAAGAGCAAACUGGACAUUUCUAUUAAAAUUUCAUCCAUUUCUUCUGUUAAAAACUGAUGUAGCUGACAAAUUAAUCAUACAGUUACAUGUGAUGUAUCAUAUGUACCUCGUGUUGACGUACAGGGACCAAUUUUUAACAGUAGAAAUGGAUGGAAUUUUUAACAGAAUGACUAGUUUGCUCUUUGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017754991.1 |
|
2.0 | PREDICTED: Gossypium arboreum ethanolamine-phosphate cytidylyltransferase-like (LOC108456383), transcript variant X3, mRNA | ethanolamine-phosphate cytidylyltransferase-like(LOC108456383) | coding protein | psRNATarget | |||||||||
| XM_017784090.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108480941 (LOC108480941), transcript variant X1, mRNA | uncharacterized LOC108480941(LOC108480941) | coding protein | psRNATarget |