ncRNA ID | novel_gar_miR1612 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:126656576-126656720 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 122 - AAUGUGUGUGAGUGUGGUAAUCCU - 145 |
Stem-loop(if miRNA) |
---AAUGU       U UG U     -------       ----------    -U   -U      AGA    A   -AA   U         GUGUGAG G  G AAUCC       UCCCCUU          GCCG  GAG  UGAGAA   GGGA GAA   AAU U         ||||||| |  | |||||       |||||||          ||||  |||  ||||||   |||| |||   |||         CGUACUU C  U UUAGG       AGGGGAA          CGGU  UUC  ACUCUU   UCCU CUU   UUG U AUUUGGUU       - GU U     AGAAAGA       UACUAAAAGC    UU   UU      ---    A   GUG   U |
Stem-loop sequence | AAUGUGUGUGAGUGUGGUAAUCCUCCCCUUGCCGUGAGUUGAGAAAGAGGGAAGAAAAAAUUUUUGUUGUGUUCAUCCUUUCUCAUUCUUUUUGGCCGAAAAUCAUAAGGGGAAGAAAGAGGAUUUUUGCUUCAUGCUUGGUUUA |