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BaseInfo

ncRNA ID novel_gar_miR1612
Species Gossypium arboreum
Class miRNA
Genome position Chr12:126656576-126656720 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 122 - AAUGUGUGUGAGUGUGGUAAUCCU - 145
Stem-loop(if miRNA) ---AAUGU       U UG U     -------       ----------    -U   -U      AGA    A   -AA   U
        GUGUGAG G  G AAUCC       UCCCCUU          GCCG  GAG  UGAGAA   GGGA GAA   AAU U
        ||||||| |  | |||||       |||||||          ||||  |||  ||||||   |||| |||   |||
        CGUACUU C  U UUAGG       AGGGGAA          CGGU  UUC  ACUCUU   UCCU CUU   UUG U
AUUUGGUU       - GU U     AGAAAGA       UACUAAAAGC    UU   UU      ---    A   GUG   U
Stem-loop sequence AAUGUGUGUGAGUGUGGUAAUCCUCCCCUUGCCGUGAGUUGAGAAAGAGGGAAGAAAAAAUUUUUGUUGUGUUCAUCCUUUCUCAUUCUUUUUGGCCGAAAAUCAUAAGGGGAAGAAAGAGGAUUUUUGCUUCAUGCUUGGUUUA