ncRNA ID | novel_gar_miR1600 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:129410514-129410698 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 162 - AUAAGGAUGACGUGGAAUCACAAU - 185 |
Stem-loop(if miRNA) |
--                       A      -  C                           C       C    A     -AG     UUUG   UGUGAUUUUACGUCAUCCUUAUC UUUUUC AA GGGAGAAUGACAAAUCAGAUUUUUUCU CUAAUUU UAGU UUUUU   UUGGA    G   ||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||||||| |||| |||||   |||||   ACACUAAGGUGCAGUAGGAAUAG GGAAAG UU CCCUCUUACUGUUUAGUCUAAAAAGGA GAUUAAA GUCG AAAAA   GACUU    A UA                       -      A  A                           A       A    A     GAG     UUUU |
Stem-loop sequence | UGUGAUUUUACGUCAUCCUUAUCAUUUUUCAACGGGAGAAUGACAAAUCAGAUUUUUUCUCCUAAUUUCUAGUAUUUUUAGUUGGAUUUGGAUUUUUUCAGGAGAAAAAAGCUGAAAAUUAGAAGGAAAAAUCUGAUUUGUCAUUCUCCCAUUAGAAAGGGAUAAGGAUGACGUGGAAUCACAAU |