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BaseInfo

ncRNA ID novel_gar_miR1599
Species Gossypium arboreum
Class miRNA
Genome position Chr1:129410519-129410693 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 152 - AAGGGAUAAGGAUGACGUGGAAUC - 175
Stem-loop(if miRNA) --                  A      -  C                           C       C    A     -AG     UUUG
  UUUUACGUCAUCCUUAUC UUUUUC AA GGGAGAAUGACAAAUCAGAUUUUUUCU CUAAUUU UAGU UUUUU   UUGGA    G
  |||||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||||||| |||| |||||   |||||
  AAGGUGCAGUAGGAAUAG GGAAAG UU CCCUCUUACUGUUUAGUCUAAAAAGGA GAUUAAA GUCG AAAAA   GACUU    A
CU                  -      A  A                           A       A    A     GAG     UUUU
Stem-loop sequence UUUUACGUCAUCCUUAUCAUUUUUCAACGGGAGAAUGACAAAUCAGAUUUUUUCUCCUAAUUUCUAGUAUUUUUAGUUGGAUUUGGAUUUUUUCAGGAGAAAAAAGCUGAAAAUUAGAAGGAAAAAUCUGAUUUGUCAUUCUCCCAUUAGAAAGGGAUAAGGAUGACGUGGAAUC