ncRNA ID | novel_gar_miR1599 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:129410519-129410693 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 152 - AAGGGAUAAGGAUGACGUGGAAUC - 175 |
Stem-loop(if miRNA) |
--                  A      -  C                           C       C    A     -AG     UUUG   UUUUACGUCAUCCUUAUC UUUUUC AA GGGAGAAUGACAAAUCAGAUUUUUUCU CUAAUUU UAGU UUUUU   UUGGA    G   |||||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||||||| |||| |||||   |||||   AAGGUGCAGUAGGAAUAG GGAAAG UU CCCUCUUACUGUUUAGUCUAAAAAGGA GAUUAAA GUCG AAAAA   GACUU    A CU                  -      A  A                           A       A    A     GAG     UUUU |
Stem-loop sequence | UUUUACGUCAUCCUUAUCAUUUUUCAACGGGAGAAUGACAAAUCAGAUUUUUUCUCCUAAUUUCUAGUAUUUUUAGUUGGAUUUGGAUUUUUUCAGGAGAAAAAAGCUGAAAAUUAGAAGGAAAAAUCUGAUUUGUCAUUCUCCCAUUAGAAAGGGAUAAGGAUGACGUGGAAUC |