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BaseInfo

ncRNA ID novel_gar_miR1598
Species Gossypium arboreum
Class miRNA
Genome position Chr11:7579400-7579598 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 1 - AUCUAUCUGACAAUCUAUUUUCGU - 24
Stem-loop(if miRNA) --                     C                  AAAC   U  UA            ---AA   AGCAAAGAAAAAGAAUUUUUUUUUAAA
  AUCUAUCUGACAAUCUAUUUU GUAUAUAAUAAAUUUUUU    CCA AU  GUAAAAAACCCG     UUU                           A
  ||||||||||||||||||||| ||||||||||||||||||    ||| ||  ||||||||||||     |||
  UAGAUAGACUGUUAGAUAAAA CAUAUAUUAUUUAAGAAA    GGU UA  CAUUUUUUGGGC     AAA                           A
AU                     A                  AUAU   U  UC            ACAGA   AGGAAGUUUUAGUUAGAGUAAUCUUAA
Stem-loop sequence AUCUAUCUGACAAUCUAUUUUCGUAUAUAAUAAAUUUUUUAAACCCAUAUUAGUAAAAAACCCGAAUUUAGCAAAGAAAAAGAAUUUUUUUUUAAAAAAAUUCUAAUGAGAUUGAUUUUGAAGGAAAAAGACACGGGUUUUUUACCUAUUUGGUAUAAAAGAAUUUAUUAUAUACAAAAAUAGAUUGUCAGAUAGAUUA