ncRNA ID | novel_gar_miR1596 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:55804068-55804137 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CGGAGCGGCCGGUCUUGUCAU - 21 |
Stem-loop(if miRNA) |
--     C  CC       U    - C   UG      CGGAG GG  GGUCUUG CAUC C UUU  CCCA   ||||| ||  ||||||| |||| | |||  |||U   GCUUU CC  CUAGGAC GUAG G GGG  GGGU UA     U  AA       U    A U   GU    |
Stem-loop sequence | CGGAGCGGCCGGUCUUGUCAUCCCUUUUGCCCAUUGGGUGGGGUGAGAUGUCAGGAUCAACCUUUUCGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017753790.1 |
|
0.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108455200 (LOC108455200), mRNA | uncharacterized LOC108455200(LOC108455200) | coding protein | psRNATarget | |||||||||
XM_017753787.1 |
|
0.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108455194 (LOC108455194), mRNA | uncharacterized LOC108455194(LOC108455194) | coding protein | psRNATarget |