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BaseInfo

ncRNA ID	novel_gar_miR1592
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr11:41918267-41918424 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180720
Length	24
Mature sequence(if miRNA)	135 - AUUUGGACUGCCACAUAGGACUGC - 158
Stem-loop(if miRNA)	--       CA                        U            CCCUAC U  UAGUCCAAAUUAAAUUUAUUUAAU   GGUCCUA  UGGCAGUCCAAAUGGGUUUUAAAU CCAACUUGGAUG      G GA                        U   |||||||  |||||||||||||||||||||||| ||||||||||||      | ||   UCAGGAU  ACCGUCAGGUUUAUUUAAAAUUUA GGUUGAACCUAC      G GU                        A CG       AC                        C            -----A -  CAACAACCCUACUUUUAUCCAAAA
Stem-loop sequence	GGUCCUACAUGGCAGUCCAAAUGGGUUUUAAAUUCCAACUUGGAUGCCCUACGUGAUAGUCCAAAUUAAAUUUAUUUAAUUAAAAACCUAUUUUCAUCCCAACAACUGGACAUCCAAGUUGGCAUUUAAAAUUUAUUUGGACUGCCACAUAGGACUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017753110.1	ncRNA:24   CGUCAGGAUACACCGUCAGGUUUA   1   |**|||=||||||||||||=|||| targets:1669   GAUGUCUUAUGUGGCAGUCUAAAU   1692 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X7, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753109.1	ncRNA:24   CGUCAGGAUACACCGUCAGGUUUA   1   |**|||=||||||||||||=|||| targets:1672   GAUGUCUUAUGUGGCAGUCUAAAU   1695 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X6, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753105.1	ncRNA:24   CGUCAGGAUACACCGUCAGGUUUA   1   |**|||=||||||||||||=|||| targets:1702   GAUGUCUUAUGUGGCAGUCUAAAU   1725 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X3, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753107.1	ncRNA:24   CGUCAGGAUACACCGUCAGGUUUA   1   |**|||=||||||||||||=|||| targets:1759   GAUGUCUUAUGUGGCAGUCUAAAU   1782 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X4, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753108.1	ncRNA:24   CGUCAGGAUACACCGUCAGGUUUA   1   |**|||=||||||||||||=|||| targets:1777   GAUGUCUUAUGUGGCAGUCUAAAU   1800 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X5, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753103.1	ncRNA:24   CGUCAGGAUACACCGUCAGGUUUA   1   |**|||=||||||||||||=|||| targets:1807   GAUGUCUUAUGUGGCAGUCUAAAU   1830 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X1, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753104.1	ncRNA:24   CGUCAGGAUACACCGUCAGGUUUA   1   |**|||=||||||||||||=|||| targets:1862   GAUGUCUUAUGUGGCAGUCUAAAU   1885 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X2, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget