| ncRNA ID | novel_gar_miR1589 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr1:105425856-105426069 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180720 |
| Length | 24 |
| Mature sequence(if miRNA) | 191 - AAGGAGGUAACAGAGUUUAACGGU - 214 |
| Stem-loop(if miRNA) |
--CA C C UG UA UC A A AAUG ---AGA -- GGGAUGAAAGUAGAUUUUU UUAAAUUC GUUACCUUC UAA G GUCUUAUGUGGCAGU AAAUAAGUUUU AAU UCAACUUA GUC UGC U A |||||||| ||||||||| ||| | ||||||||||||||| ||||||||||| ||| |||||||| ||| ||| | AAUUUGAG CAAUGGAGG AUU U UAGGAUAUACCGUUA UUUAUUUAAAA UUA AGUUGAAU UAG CUG A A UGGC A A GU GC GA C C -CUA AAUGCA UC AGUUUAAUUUAAAUAAAUU |
| Stem-loop sequence | CAUUAAAUUCCGUUACCUUCCUAAUGGUAGUCUUAUGUGGCAGUUCAAAUAAGUUUUAAAUAUCAACUUAAAUGGUCAGAUGCUGGGAUGAAAGUAGAUUUUUAAUUAAAUAAAUUUAAUUUGAACUGUCACGUAAGAUAUCUAAGUUGACAUUCAAAAUUUAUUUAGAUUGCCAUAUAGGAUCGUUGUUAAGGAGGUAACAGAGUUUAACGGU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017781944.1 |
|
2.5 | PREDICTED: Gossypium arboreum auxin response factor 8-like (LOC108479383), transcript variant X2, mRNA | auxin response factor 8-like(LOC108479383) | coding protein | psRNATarget | |||||||||
| XM_017781943.1 |
|
2.5 | PREDICTED: Gossypium arboreum auxin response factor 8-like (LOC108479383), transcript variant X1, mRNA | auxin response factor 8-like(LOC108479383) | coding protein | psRNATarget |