ncRNA ID | novel_gar_miR1588 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:105425872-105426053 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 159 - AUAUAGGAUCGUUGUUAAGGAGGU - 182 |
Stem-loop(if miRNA) |
-      -  UG UA               UC           A   A        AAUG   ---AGA   -- GGGAUGAAAGUAGAUUUUU  CUUCCU AA  G  GUCUUAUGUGGCAGU  AAAUAAGUUUU AAU UCAACUUA    GUC      UGC  U                   A  |||||| ||  |  |||||||||||||||  ||||||||||| ||| ||||||||    |||      |||  |  GGAGGA UU  U  UAGGAUAUACCGUUA  UUUAUUUAAAA UUA AGUUGAAU    UAG      CUG  A                   A U      A  GU GC               GA           C   C        -CUA   AAUGCA   UC AGUUUAAUUUAAAUAAAUU |
Stem-loop sequence | CUUCCUAAUGGUAGUCUUAUGUGGCAGUUCAAAUAAGUUUUAAAUAUCAACUUAAAUGGUCAGAUGCUGGGAUGAAAGUAGAUUUUUAAUUAAAUAAAUUUAAUUUGAACUGUCACGUAAGAUAUCUAAGUUGACAUUCAAAAUUUAUUUAGAUUGCCAUAUAGGAUCGUUGUUAAGGAGGU |