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BaseInfo

ncRNA ID novel_gar_miR1581
Species Gossypium arboreum
Class miRNA
Genome position Chr11:55003260-55003336 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 21
Mature sequence(if miRNA) 1 - CCAUGAUCUUUAGCGGCGUUU - 21
Stem-loop(if miRNA) --            GC    A               GU
  GCGCCGCUAAAG  CAUG CCUUUAGCGGCGUUU  U
  ||||||||||||  |||| |||||||||||||||  G
  UGCGGCGAUUUC  GUAC GGAAAUCGCCGCGAA  G
UU            UA    C               AA
Stem-loop sequence GCGCCGCUAAAGGCCAUGACCUUUAGCGGCGUUUGUUGGAAAAGCGCCGCUAAAGGCCAUGAUCUUUAGCGGCGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017768165.1
ncRNA:21   UUUGCGGCGAUUUCUAGUACC   1
  ||=|||||||||||||||||*
targets:1500   AAGCGCCGCUAAAGAUCAUGU   1520

2.0 PREDICTED: Gossypium arboreum diphthamide biosynthesis protein 2-like (LOC108467522), mRNA diphthamide biosynthesis protein 2-like(LOC108467522) coding protein psRNATarget