ncRNA ID | novel_gar_miR1579 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:59806084-59806244 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CACGAAUCUCGGUUUUAUCUU - 21 |
Stem-loop(if miRNA) |
-GC          -AG   AGCAAGAAA  CCACCCGUGCAAGAAACUAAAAAGCCUGUGGAUGAGGAGGAAGCACAAGAGUUU    AUGAGGCCGA   UCG         UU                                                      U    ||||||||||   |||         ||                                                      U    UAUUUUGGCU   AGC         CG                                                      G UUC          CUA   --------A  ACCAACGAAUAAAUUAACAAGGUGGUGUAACAUAAGUGACACAAACUAUUUAAA |
Stem-loop sequence | GCAUGAGGCCGAAGUCGAGCAAGAAAUUCCACCCGUGCAAGAAACUAAAAAGCCUGUGGAUGAGGAGGAAGCACAAGAGUUUUUGAAAUUUAUCAAACACAGUGAAUACAAUGUGGUGGAACAAUUAAAUAAGCAACCAGCACGAAUCUCGGUUUUAUCUU |