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BaseInfo

ncRNA ID novel_gar_miR1579
Species Gossypium arboreum
Class miRNA
Genome position Chr11:59806084-59806244 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 21
Mature sequence(if miRNA) 1 - CACGAAUCUCGGUUUUAUCUU - 21
Stem-loop(if miRNA) -GC          -AG   AGCAAGAAA  CCACCCGUGCAAGAAACUAAAAAGCCUGUGGAUGAGGAGGAAGCACAAGAGUUU
   AUGAGGCCGA   UCG         UU                                                      U
   ||||||||||   |||         ||                                                      U
   UAUUUUGGCU   AGC         CG                                                      G
UUC          CUA   --------A  ACCAACGAAUAAAUUAACAAGGUGGUGUAACAUAAGUGACACAAACUAUUUAAA
Stem-loop sequence GCAUGAGGCCGAAGUCGAGCAAGAAAUUCCACCCGUGCAAGAAACUAAAAAGCCUGUGGAUGAGGAGGAAGCACAAGAGUUUUUGAAAUUUAUCAAACACAGUGAAUACAAUGUGGUGGAACAAUUAAAUAAGCAACCAGCACGAAUCUCGGUUUUAUCUU