ncRNA ID | novel_gar_miR1574 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:38369765-38369931 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 144 - AGCGACGGAGUGAUUAAUUUGAUC - 167 |
Stem-loop(if miRNA) |
--     A          -A              A   ACA    CGAUGUAUUU    AUAUUAUUUUGAGAUAACUAAAAUAGGA   UUAAA UGGUCACUCU  UGUUAAAUGGUAAU GAA   CUAA          UCAC                            A   ||||| ||||||||||  |||||||||||||| |||   ||||          ||||                            G   AGUUU AUUAGUGAGG  GCGAUUUACCAUUA CUU   GAUU          UGUA                            A CU     A          CA              C   -AC    ------AACA    AAAGUACAAUCAGUGAGAUUUAUCAACG |
Stem-loop sequence | UUAAAAUGGUCACUCUAUGUUAAAUGGUAAUAGAAACACUAACGAUGUAUUUUCACAUAUUAUUUUGAGAUAACUAAAAUAGGAAGAGCAACUAUUUAGAGUGACUAACAUGAAAAUGUACAAUUAGCAUUCCAUUACCAUUUAGCGACGGAGUGAUUAAUUUGAUC |