Search result

BaseInfo

ncRNA ID novel_gar_miR1574
Species Gossypium arboreum
Class miRNA
Genome position Chr9:38369765-38369931 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 144 - AGCGACGGAGUGAUUAAUUUGAUC - 167
Stem-loop(if miRNA) --     A          -A              A   ACA    CGAUGUAUUU    AUAUUAUUUUGAGAUAACUAAAAUAGGA
  UUAAA UGGUCACUCU  UGUUAAAUGGUAAU GAA   CUAA          UCAC                            A
  ||||| ||||||||||  |||||||||||||| |||   ||||          ||||                            G
  AGUUU AUUAGUGAGG  GCGAUUUACCAUUA CUU   GAUU          UGUA                            A
CU     A          CA              C   -AC    ------AACA    AAAGUACAAUCAGUGAGAUUUAUCAACG
Stem-loop sequence UUAAAAUGGUCACUCUAUGUUAAAUGGUAAUAGAAACACUAACGAUGUAUUUUCACAUAUUAUUUUGAGAUAACUAAAAUAGGAAGAGCAACUAUUUAGAGUGACUAACAUGAAAAUGUACAAUUAGCAUUCCAUUACCAUUUAGCGACGGAGUGAUUAAUUUGAUC