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BaseInfo

ncRNA ID novel_gar_miR1572
Species Gossypium arboreum
Class miRNA
Genome position Chr11:97459268-97459325 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 1 - UUGCUGACGUGGACAAAACGCUCC - 24
Stem-loop(if miRNA) --    C                  AAAC
  AGUG UUUGUCCACGUCAGCAAA    G
  |||| ||||||||||||||||||
  UCGC AAACAGGUGCAGUCGUUU    C
CC    A                  CGCG
Stem-loop sequence AGUGCUUUGUCCACGUCAGCAAAAAACGCGCGCUUUGCUGACGUGGACAAAACGCUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017784438.1
ncRNA:24   CCUCGCAAAACAGGUGCAGUCGUU   1
  |||||||||||||||=|||||||*
targets:6   GGAGCGUUUUGUCCAUGUCAGCAC   29

2.5 PREDICTED: Gossypium arboreum serine/threonine-protein phosphatase 7 long form homolog (LOC108481281), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC108481281) coding protein psRNATarget