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BaseInfo

ncRNA ID novel_gar_miR1571
Species Gossypium arboreum
Class miRNA
Genome position Chr9:4539816-4539954 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 23
Mature sequence(if miRNA) 117 - AACUCGAUUCGAACUCAAAAUUC - 139
Stem-loop(if miRNA) --    C       A       UUCAA    A     C     -G C     UA U    UUA      U
  AACU GAUUCGA CUCAAAA     AAAA AGUUU GAUUU  A UUGAA  A UCGA   AUUCGA U
  |||| ||||||| |||||||     |||| ||||| |||||  | |||||  | ||||   |||||| A
  UUGA CUAAGCU GAGUUUU     UUUU UUAAA UUAAA  U AAUUU  U AGUU   UAAGCU A
UU    A       -       UUAAC    G     U     GA C     GC U    UAA      U
Stem-loop sequence AACUCGAUUCGAACUCAAAAUUCAAAAAAAAGUUUCGAUUUGACUUGAAUAAUUCGAUUAAUUCGAUUAAUUCGAAUAAUUUGAUUCGUUUAACUAGAAAUUUAAAUUGUUUUCAAUUUUUUGAGUCGAAUCAAGUUUU