ncRNA ID | novel_gar_miR1571 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:4539816-4539954 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 23 |
Mature sequence(if miRNA) | 117 - AACUCGAUUCGAACUCAAAAUUC - 139 |
Stem-loop(if miRNA) |
--    C       A       UUCAA    A     C     -G C     UA U    UUA      U   AACU GAUUCGA CUCAAAA     AAAA AGUUU GAUUU  A UUGAA  A UCGA   AUUCGA U   |||| ||||||| |||||||     |||| ||||| |||||  | |||||  | ||||   |||||| A   UUGA CUAAGCU GAGUUUU     UUUU UUAAA UUAAA  U AAUUU  U AGUU   UAAGCU A UU    A       -       UUAAC    G     U     GA C     GC U    UAA      U |
Stem-loop sequence | AACUCGAUUCGAACUCAAAAUUCAAAAAAAAGUUUCGAUUUGACUUGAAUAAUUCGAUUAAUUCGAUUAAUUCGAAUAAUUUGAUUCGUUUAACUAGAAAUUUAAAUUGUUUUCAAUUUUUUGAGUCGAAUCAAGUUUU |