ncRNA ID | novel_gar_miR1569 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:47549899-47549985 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 64 - AAUGAGGUUGAGAUUUUGACGUGU - 87 |
Stem-loop(if miRNA) |
--AA                A      A    A    -G    U     UGAGGUUGAGAUUUUG CGUGUC CUUU UGUU  UAUU A     |||||||||||||||| |||||| |||| ||||  |||| A     ACUUUAACUCUAAAAC GUGCGG GAAA AUAA  AUAA A GUUC                A      -    A    AA    A |
Stem-loop sequence | AAUGAGGUUGAGAUUUUGACGUGUCACUUUAUGUUGUAUUUAAAAAAUAAAAAUAAAAAGGGCGUGACAAAAUCUCAAUUUCACUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017763429.1 |
|
2.5 | PREDICTED: Gossypium arboreum galactinol synthase 2-like (LOC108463498), mRNA | galactinol synthase 2-like(LOC108463498) | coding protein | psRNATarget |