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BaseInfo

ncRNA ID novel_gar_miR1566
Species Gossypium arboreum
Class miRNA
Genome position Chr9:79965945-79966143 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 1 - UUGAGGGCUAAAUUUGUUGAAUUU - 24
Stem-loop(if miRNA) --                    U      U                         UAUUA        --AA    UUUGGCCCCAACAUUUACAAAAUUU
  AUUCAACAAAUUUAGCCCUC AUGUUU CAAAAUUUGUUAUUUUAGUUCUAAU     AAAAAAUC    UAAA                         G
  |||||||||||||||||||| |||||| |||||||||||||||||||||||||     ||||||||    ||||                         U
  UAAGUUGUUUAAAUCGGGAG UACAAA GUUUUAAACAGUAAAAUCAAGAUUA     UUUUUUAG    CUUA                         C
UU                    U      U                         --CGA        GUUA    AAAGUAAGAUUUUUUUAUUAAAUAA
Stem-loop sequence AUUCAACAAAUUUAGCCCUCUAUGUUUUCAAAAUUUGUUAUUUUAGUUCUAAUUAUUAAAAAAAUCAAUAAAUUUGGCCCCAACAUUUACAAAAUUUGUCAAUAAAUUAUUUUUUUAGAAUGAAAAUUCAUUGGAUUUUUUAGCAUUAGAACUAAAAUGACAAAUUUUGUAAACAUUGAGGGCUAAAUUUGUUGAAUUU