ncRNA ID | novel_gar_miR1566 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:79965945-79966143 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUGAGGGCUAAAUUUGUUGAAUUU - 24 |
Stem-loop(if miRNA) |
--                    U      U                         UAUUA        --AA    UUUGGCCCCAACAUUUACAAAAUUU   AUUCAACAAAUUUAGCCCUC AUGUUU CAAAAUUUGUUAUUUUAGUUCUAAU     AAAAAAUC    UAAA                         G   |||||||||||||||||||| |||||| |||||||||||||||||||||||||     ||||||||    ||||                         U   UAAGUUGUUUAAAUCGGGAG UACAAA GUUUUAAACAGUAAAAUCAAGAUUA     UUUUUUAG    CUUA                         C UU                    U      U                         --CGA        GUUA    AAAGUAAGAUUUUUUUAUUAAAUAA |
Stem-loop sequence | AUUCAACAAAUUUAGCCCUCUAUGUUUUCAAAAUUUGUUAUUUUAGUUCUAAUUAUUAAAAAAAUCAAUAAAUUUGGCCCCAACAUUUACAAAAUUUGUCAAUAAAUUAUUUUUUUAGAAUGAAAAUUCAUUGGAUUUUUUAGCAUUAGAACUAAAAUGACAAAUUUUGUAAACAUUGAGGGCUAAAUUUGUUGAAUUU |