ncRNA ID | novel_gar_miR1562 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:68829458-68829536 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 56 - AUAGUUGGGUGACUAAAAAAGACA - 79 |
Stem-loop(if miRNA) |
--               -     --GCU     AAAAA    A   UCUUUUUUGGUUACU AGCUG     GAUUU     UGGG A   ||||||||||||||| |||||     |||||     ||||   AGAAAAAAUCAGUGG UUGAU     CUGAA     AUCC C AC               G     AGAAU     ----A    A |
Stem-loop sequence | UCUUUUUUGGUUACUAGCUGGCUGAUUUAAAAAUGGGAACACCUAAAAGUCUAAGAUAGUUGGGUGACUAAAAAAGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017774698.1 |
|
2.5 | PREDICTED: Gossypium arboreum NDR1/HIN1-like protein 12 (LOC108473157), mRNA | NDR1/HIN1-like protein 12(LOC108473157) | coding protein | psRNATarget |