ncRNA ID | novel_gar_miR1560 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:27013142-27013269 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGGAUAUGAAUCGGAGUUGUGG - 24 |
Stem-loop(if miRNA) |
---A  GG   -    UC        GG    UUAC    --A  ---------A     A   AG   GACC     AG  AUA UGAA  GGAGUUGU  GAUU    UCGC   UC          GUGUG CUC  AAC    U     ||  ||| ||||  ||||||||  ||||    ||||   ||          ||||| |||  |||    G     UC  UGU AUUU  UCUCAACA  CUGA    AGCG   AG          UAUAU GAG  UUG    C GGUA  AA   C    --        AA    ----    GUA  GUUGAUAAGG     A   AA   AGAA |
Stem-loop sequence | AAGGGAUAUGAAUCGGAGUUGUGGGAUUUUACUCGCAUCAGUGUGACUCAGAACGACCUGCAAGAGUUAAGAGAUAUAUGGAAUAGUUGGAAUGGCGAAGUCAAACAACUCUUUUACUGUAACUAUGG |