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BaseInfo

ncRNA ID novel_gar_miR1560
Species Gossypium arboreum
Class miRNA
Genome position Chr8:27013142-27013269 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 1 - AAGGGAUAUGAAUCGGAGUUGUGG - 24
Stem-loop(if miRNA) ---A  GG   -    UC        GG    UUAC    --A  ---------A     A   AG   GACC
    AG  AUA UGAA  GGAGUUGU  GAUU    UCGC   UC          GUGUG CUC  AAC    U
    ||  ||| ||||  ||||||||  ||||    ||||   ||          ||||| |||  |||    G
    UC  UGU AUUU  UCUCAACA  CUGA    AGCG   AG          UAUAU GAG  UUG    C
GGUA  AA   C    --        AA    ----    GUA  GUUGAUAAGG     A   AA   AGAA
Stem-loop sequence AAGGGAUAUGAAUCGGAGUUGUGGGAUUUUACUCGCAUCAGUGUGACUCAGAACGACCUGCAAGAGUUAAGAGAUAUAUGGAAUAGUUGGAAUGGCGAAGUCAAACAACUCUUUUACUGUAACUAUGG