ncRNA ID | novel_gar_miR1558 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:14438200-14438307 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720;SRR3180721 |
Length | 24 |
Mature sequence(if miRNA) | 85 - AAAAUGAUUAUGGAUGAAUGGUUG - 108 |
Stem-loop(if miRNA) |
--     -   UA    U   U    GAGAUA    U  A      -GC    AGGG   AAAAU GAU  UGGA GAA GGUU      CGGU AG UAUCGC   AUGA    C   ||||| |||  |||| ||| ||||      |||| || ||||||   ||||    U   UUUUA CUG  ACCU UUU UCAG      GUCA UC GUAGUG   UGCU    A UG     U   --    U   U    ---AGG    U  A      AAU    AAAU |
Stem-loop sequence | AAAAUGAUUAUGGAUGAAUGGUUGAGAUACGGUUAGAUAUCGCGCAUGAAGGGCUAUAAAUCGUUAAGUGAUGACUUACUGGGAGACUUUUUUUCCAGUCUAUUUUGU |