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BaseInfo

ncRNA ID novel_gar_miR1556
Species Gossypium arboreum
Class miRNA
Genome position Chr8:57845633-57845835 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 22
Mature sequence(if miRNA) 1 - UGCACGUCGUAUCUCCACUAGC - 22
Stem-loop(if miRNA) --     -         U            A           A             A                     -GU   CCAAG   U     GGA   G
  UGGUG AGAUACGAC UGCAAGCUCACG GGGAAGUGUCA UAUUGUGUAAAAU UUAAUUAUGCAUAUUGUGCCU   GGG     UGG ACCAU   AGC A
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  AUCAC UCUAUGCUG ACGUUUGAGUGC CUCUUCACAGU AUGACACGUUUUA AAUUAAUACGUAUAACACGGA   CCC     GCU UGGUG   UUG A
CG     C         C            C           C             A                     AUU   --UAA   -     --G   G
Stem-loop sequence UGGUGAGAUACGACUUGCAAGCUCACGAGGGAAGUGUCAAUAUUGUGUAAAAUAUUAAUUAUGCAUAUUGUGCCUGUGGGCCAAGUGGUACCAUGGAAGCGAAGGUUGGUGGUUCGAAUCCCUUAAGGCACAAUAUGCAUAAUUAAAAUUUUGCACAGUACUGACACUUCUCCCGUGAGUUUGCACGUCGUAUCUCCACUAGC