ncRNA ID | novel_gar_miR1556 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:57845633-57845835 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UGCACGUCGUAUCUCCACUAGC - 22 |
Stem-loop(if miRNA) |
--     -         U            A           A             A                     -GU   CCAAG   U     GGA   G   UGGUG AGAUACGAC UGCAAGCUCACG GGGAAGUGUCA UAUUGUGUAAAAU UUAAUUAUGCAUAUUGUGCCU   GGG     UGG ACCAU   AGC A   ||||| ||||||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||   |||     ||| |||||   |||   AUCAC UCUAUGCUG ACGUUUGAGUGC CUCUUCACAGU AUGACACGUUUUA AAUUAAUACGUAUAACACGGA   CCC     GCU UGGUG   UUG A CG     C         C            C           C             A                     AUU   --UAA   -     --G   G |
Stem-loop sequence | UGGUGAGAUACGACUUGCAAGCUCACGAGGGAAGUGUCAAUAUUGUGUAAAAUAUUAAUUAUGCAUAUUGUGCCUGUGGGCCAAGUGGUACCAUGGAAGCGAAGGUUGGUGGUUCGAAUCCCUUAAGGCACAAUAUGCAUAAUUAAAAUUUUGCACAGUACUGACACUUCUCCCGUGAGUUUGCACGUCGUAUCUCCACUAGC |