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BaseInfo

ncRNA ID	novel_gar_miR1555
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr8:66808482-66808550 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180720
Length	24
Mature sequence(if miRNA)	1 - AUAUUUGGUUGAAUGGAAUGAUGU - 24
Stem-loop(if miRNA)	--  UG   G   G   G     GAAU    A   A   AU  UUU AUU AAU GAAUG    AGAA UAU A   ||  ||| ||| ||| |||||    |||| |||   UA  AAG UAA UUG UUUAU    UCUU AUG U UG  GU   G   G   G     --AU    -   G
Stem-loop sequence	AUUGUUUGAUUGAAUGGAAUGGAAUAGAAAUAUAAUGGUAUUCUUAUAUUUGGUUGAAUGGAAUGAUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017758629.1	ncRNA:24   UGUA-GUAAGGUAAGUUGGUUUAUA   1   |=||-||||||||||*||||||||| targets:347   AUAUUCAUUCCAUUCCACCAAAUAU   371 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum probable leucine-rich repeat receptor-like protein kinase At1g35710 (LOC108459285), mRNA	probable leucine-rich repeat receptor-like protein kinase At1g35710(LOC108459285)	coding protein	psRNATarget
XM_017754126.1	ncRNA:24   UGUAGUAAGGUAAGUUGGUUUAUA   1   ||=--=||||||||*||||||||| targets:593   ACG--GUUCCAUUCCACCAAAUAU   614 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum MDIS1-interacting receptor like kinase 2-like (LOC108455577), mRNA	MDIS1-interacting receptor like kinase 2-like(LOC108455577)	coding protein	psRNATarget
XM_017754127.1	ncRNA:24   UGUAGUAAGGUAAGUUGGUUUAUA   1   ||=--=||||||||*||||||||| targets:605   ACG--GUUCCAUUCCACCAAAUAU   626 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum MDIS1-interacting receptor like kinase 2-like (LOC108455578), mRNA	MDIS1-interacting receptor like kinase 2-like(LOC108455578)	coding protein	psRNATarget