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BaseInfo

ncRNA ID ath-miRf11096-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AACAGAGACCAUCUCUUCCC - NA
Stem-loop(if miRNA)   UAUA     G       C        A       UUACUGAU
GG    AAACA AGACCAU UCUUCCCA UAUGCGC        A
||    ||||| ||||||| |||||||| |||||||
CC    UUUGU UCUGGUA AGAAGGGU AUACGCG        A
  UCUG     A       C        C       CUUUCAGA
Stem-loop sequence GGUAUAAAACAGAGACCAUCUCUUCCCAAUAUGCGCUUACUGAUAAAGACUUUCGCGCAUACUGGGAAGACAUGGUCUAUGUUUGUCUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_116597.1
ncRNA:20   CCCUUCUCUACCAGAGACAA   1
  |||||||||||||||*||||
targets:497   GGGAAGAGAUGGUCUAUGUU   516

1.5 Arabidopsis thaliana Cystatin/monellin superfamily protein partial mRNA Cystatin/monellin superfamily protein(AT4G03590) coding protein psRNATarget
BT008675.1
ncRNA:20   CCCUUCUCUACCAGAGACAA   1
  *|||||||||||||*||||*
targets:148   UGGAAGAGAUGGUCACUGUG   167

2.5 Arabidopsis thaliana clone RAFL19-53-A21 (R50699) unknown protein (At3g18940) mRNA, partial cds NA coding protein psRNATarget
AK229611.1
ncRNA:20   CCCUUCUCUACCAGAGACAA   1
  *|||||||||||||*||||*
targets:208   UGGAAGAGAUGGUCACUGUG   227

2.5 Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL19-53-A21 NA coding protein psRNATarget