ncRNA ID | novel_gar_miR1546 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:113736882-113737034 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAAAGACUGAUGUUGGGUAUGCC - 24 |
Stem-loop(if miRNA) |
--   AA    GA           ---CC   -------------     UGUAAUUGGAUAUGAUUUAUCAAGAUAGGAUUUGU   AUA  GACU  UGUUGGGUAUG     GCA             AUCUA                                   C   |||  ||||  |||||||||||     |||             |||||                                   C   UAU  UUGA  AUAACUCAUAU     CGU             AGGUA                                   C AG   AG    --           CAGUA   AAAGAUCAGAGUG     GUUCUCCGGAUUCUAUAACGAGGGUAAUACAUCCU |
Stem-loop sequence | AUAAAGACUGAUGUUGGGUAUGCCGCAAUCUAUGUAAUUGGAUAUGAUUUAUCAAGAUAGGAUUUGUCCCUCCUACAUAAUGGGAGCAAUAUCUUAGGCCUCUUGAUGGAGUGAGACUAGAAAUGCAUGACUAUACUCAAUAAGUUGAUAUGA |