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BaseInfo

ncRNA ID novel_gar_miR1538
Species Gossypium arboreum
Class miRNA
Genome position Chr7:44014525-44014641 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 94 - AAUAAAUAGUCAAAACGGAACAUG - 117
Stem-loop(if miRNA) --G          CAAA   --       ---A G A  G      UAUCAAUCA    GUAG
   GUUCUGUUUU    GAU  UUUAUUC    U U UU CAUUUU         UCUU    A
   ||||||||||    |||  |||||||    | | || ||||||         ||||
   CAAGGCAAAA    CUG  AAAUAAG    A A AA GUAAAA         AGAA    U
GUA          ----   AU       GAAG G A  G      UUUAAGAAG    AAUG
Stem-loop sequence GGUUCUGUUUUCAAAGAUUUUAUUCAUGUAUUGCAUUUUUAUCAAUCAUCUUGUAGAUGUAAAAGAGAAGAAUUUAAAAUGGAAAAGAGAAGGAAUAAAUAGUCAAAACGGAACAUG