ncRNA ID | novel_gar_miR1538 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr7:44014525-44014641 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 94 - AAUAAAUAGUCAAAACGGAACAUG - 117 |
Stem-loop(if miRNA) |
--G          CAAA   --       ---A G A  G      UAUCAAUCA    GUAG    GUUCUGUUUU    GAU  UUUAUUC    U U UU CAUUUU         UCUU    A    ||||||||||    |||  |||||||    | | || ||||||         ||||    CAAGGCAAAA    CUG  AAAUAAG    A A AA GUAAAA         AGAA    U GUA          ----   AU       GAAG G A  G      UUUAAGAAG    AAUG |
Stem-loop sequence | GGUUCUGUUUUCAAAGAUUUUAUUCAUGUAUUGCAUUUUUAUCAAUCAUCUUGUAGAUGUAAAAGAGAAGAAUUUAAAAUGGAAAAGAGAAGGAAUAAAUAGUCAAAACGGAACAUG |