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BaseInfo

ncRNA ID novel_gar_miR1523
Species Gossypium arboreum
Class miRNA
Genome position Chr7:110317909-110318120 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 189 - AUGGUCUAUUUUUAAUUAUUUAAU - 212
Stem-loop(if miRNA) --AU   CUA                                      AUCA    C               U              UC C       -    CUG
    GGU   UUUUUAAUUAUUUAAUGGUAUUUCAAUAAUUUUUUUAU    UUGG AUAUAAUUUUGGUAA UUUUUUACCUUGAA  U AAACUUA AAUC   A
    |||   ||||||||||||||||||||||||||||||||||||||    |||| ||||||||||||||| ||||||||||||||  | ||||||| ||||   A
    CCA   AAAAAUUAAUAAAUUACUAUAAAGUUAUUAAAAAAAUA    AAUU UGUAUUAAAACUAUU AAAAAAUGGGAUUU  A UUUGAGU UUAG   C
AAUC   AUG                                      CGAC    A               U              GA A       C    AUU
Stem-loop sequence AUGGUCUAUUUUUAAUUAUUUAAUGGUAUUUCAAUAAUUUUUUUAUAUCAUUGGCAUAUAAUUUUGGUAAUUUUUUUACCUUGAAUCUCAAACUUAAAUCCUGAACUUAGAUUCUGAGUUUAAAGUUUAGGGUAAAAAAUUUAUCAAAAUUAUGUAUUAACAGCAUAAAAAAAUUAUUGAAAUAUCAUUAAAUAAUUAAAAAGUAACCCUAA