ncRNA ID | novel_gar_miR1523 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr7:110317909-110318120 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 189 - AUGGUCUAUUUUUAAUUAUUUAAU - 212 |
Stem-loop(if miRNA) |
--AU   CUA                                      AUCA    C               U              UC C       -    CUG     GGU   UUUUUAAUUAUUUAAUGGUAUUUCAAUAAUUUUUUUAU    UUGG AUAUAAUUUUGGUAA UUUUUUACCUUGAA  U AAACUUA AAUC   A     |||   ||||||||||||||||||||||||||||||||||||||    |||| ||||||||||||||| ||||||||||||||  | ||||||| ||||   A     CCA   AAAAAUUAAUAAAUUACUAUAAAGUUAUUAAAAAAAUA    AAUU UGUAUUAAAACUAUU AAAAAAUGGGAUUU  A UUUGAGU UUAG   C AAUC   AUG                                      CGAC    A               U              GA A       C    AUU |
Stem-loop sequence | AUGGUCUAUUUUUAAUUAUUUAAUGGUAUUUCAAUAAUUUUUUUAUAUCAUUGGCAUAUAAUUUUGGUAAUUUUUUUACCUUGAAUCUCAAACUUAAAUCCUGAACUUAGAUUCUGAGUUUAAAGUUUAGGGUAAAAAAUUUAUCAAAAUUAUGUAUUAACAGCAUAAAAAAAUUAUUGAAAUAUCAUUAAAUAAUUAAAAAGUAACCCUAA |