ncRNA ID | novel_gar_miR1517 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:59112198-59112267 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 47 - UUGCUGACGUGGACAAAACGCUCU - 70 |
Stem-loop(if miRNA) |
-- C AA AU U AGCG UUUGUCCACGUCAGCAAA ACGC CC U |||| |||||||||||||||||| |||| || UCGC AAACAGGUGCAGUCGUUU UGCG GG G UC A CG -- A |
Stem-loop sequence | AGCGCUUUGUCCACGUCAGCAAAAAACGCAUCCUUGAGGGCGUGCUUUGCUGACGUGGACAAAACGCUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017784438.1 |
|
2.5 | PREDICTED: Gossypium arboreum serine/threonine-protein phosphatase 7 long form homolog (LOC108481281), mRNA | serine/threonine-protein phosphatase 7 long form homolog(LOC108481281) | coding protein | psRNATarget |