| ncRNA ID | novel_gar_miR1516 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr6:56711521-56711667 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180720 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - CAAUCUCCUAAUUCUUCUUGUAGA - 24 |
| Stem-loop(if miRNA) |
-- C U - A U UCAAACAAUGUAUC U UUUCUUUUAAAAUUAUU CAAUCUC UAAU CUU CUUGU GAG UUAAAAACUCC AAAUA UUU U ||||||| |||| ||| ||||| ||| ||||||||||| ||||| ||| GUUAGAG AUUG GAA GAACA CUC AAUUUUUGAGG AUAUU UUU A CA A - U C U ----------UCAU - AUUAAAAAGUAUUAUUA |
| Stem-loop sequence | CAAUCUCCUAAUUCUUCUUGUAGAGUUUAAAAACUCCUCAAACAAUGUAUCAAAUAUUUUUUUCUUUUAAAAUUAUUUAAUUAUUAUGAAAAAUUAUUUUUAUAUACUGGAGUUUUUAAUCUCCACAAGUAAGGUUAAGAGAUUGAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017749289.1 |
|
1.5 | PREDICTED: Gossypium arboreum RNA pseudouridine synthase 7-like (LOC108451619), mRNA | RNA pseudouridine synthase 7-like(LOC108451619) | coding protein | psRNATarget |