ncRNA ID | novel_gar_miR1499 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:62194142-62194332 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUUUGCUAAUGUAGAAUACACGU - 24 |
Stem-loop(if miRNA) |
--      C      A A               A     C         CAA             U       --         UCAAUAA     A   ACUUUG UAAUGU G AUACACGUGGAUUGC AUGUG AUGACAUAU   CAUUUAAUUAAUU UUUAAAA  UUUAAAAGU       AAUAU A   |||||| |||||| | ||||||||||||||| ||||| |||||||||   ||||||||||||| |||||||  |||||||||       ||||| A   UGAAAC AUUACA C UAUGUGUACUUAACG UGUAU UAUUGUGUA   GUAAAUUAAUUAA AAAUUUU  AAAUUUUUA       UUAUG A UU      A      C G               G     -         AUC             C       UA         -UAAAAA     U |
Stem-loop sequence | ACUUUGCUAAUGUAGAAUACACGUGGAUUGCAAUGUGCAUGACAUAUCAACAUUUAAUUAAUUUUUUAAAAUUUAAAAGUUCAAUAAAAUAUAAAAUGUAUUAAAAAUAUUUUUAAAAUUUUUAAACAAUUAAUUAAAUGCUAAUGUGUUAUUAUGUGGCAAUUCAUGUGUAUGCCACAUUAACAAAGUUU |