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BaseInfo

ncRNA ID novel_gar_miR1499
Species Gossypium arboreum
Class miRNA
Genome position Chr10:62194142-62194332 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 1 - ACUUUGCUAAUGUAGAAUACACGU - 24
Stem-loop(if miRNA) --      C      A A               A     C         CAA             U       --         UCAAUAA     A
  ACUUUG UAAUGU G AUACACGUGGAUUGC AUGUG AUGACAUAU   CAUUUAAUUAAUU UUUAAAA  UUUAAAAGU       AAUAU A
  |||||| |||||| | ||||||||||||||| ||||| |||||||||   ||||||||||||| |||||||  |||||||||       ||||| A
  UGAAAC AUUACA C UAUGUGUACUUAACG UGUAU UAUUGUGUA   GUAAAUUAAUUAA AAAUUUU  AAAUUUUUA       UUAUG A
UU      A      C G               G     -         AUC             C       UA         -UAAAAA     U
Stem-loop sequence ACUUUGCUAAUGUAGAAUACACGUGGAUUGCAAUGUGCAUGACAUAUCAACAUUUAAUUAAUUUUUUAAAAUUUAAAAGUUCAAUAAAAUAUAAAAUGUAUUAAAAAUAUUUUUAAAAUUUUUAAACAAUUAAUUAAAUGCUAAUGUGUUAUUAUGUGGCAAUUCAUGUGUAUGCCACAUUAACAAAGUUU