ncRNA ID | novel_gar_miR1498 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:71485201-71485323 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 100 - AAGGACUAAAUUGCAUAAAGAGUG - 123 |
Stem-loop(if miRNA) |
--      U   CU    --      -UG      U        --       ----G           CUCUUU UGU  AUUU  UCUUUG   UUGGUU CUUUUAGU  AUGUGUA     UUAAUUAGG   |||||| |||  ||||  ||||||   |||||| ||||||||  |||||||     ||||||||U   GAGAAA ACG  UAAA  AGGAAU   GAUUAA GAGAAUUA  UACGUAU     GAUUGGUUU GU      U   -U    UC      UUG      U        AG       AAGUA         |
Stem-loop sequence | CUCUUUUUGUCUAUUUUCUUUGUGUUGGUUUCUUUUAGUAUGUGUAGUUAAUUAGGUUUUGGUUAGAUGAAUAUGCAUGAAUUAAGAGUAAUUAGGUUUAAGGACUAAAUUGCAUAAAGAGUG |