| ncRNA ID | novel_gar_miR1490 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr11:26193218-26193320 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180719 |
| Length | 24 |
| Mature sequence(if miRNA) | 80 - AGGAAGAAAAAUCUGAUUUGUCAU - 103 |
| Stem-loop(if miRNA) |
-- C C CUC AAAA GAUAAAUCAGAUUUUUC UCUUGAUUUU AGCAUUUUU UGAA A ||||||||||||||||| |||||||||| ||||||||| |||| U CUGUUUAGUCUAAAAAG AGGACUAAAA UCGUAAAAG ACUU U UA A A UCA AAAC |
| Stem-loop sequence | GAUAAAUCAGAUUUUUCCUCUUGAUUUUCAGCAUUUUUCUCUGAAAAAAAUUCAAAUUCAACUGAAAAUGCUAAAAAUCAGGAAGAAAAAUCUGAUUUGUCAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017753143.1 |
|
2.5 | PREDICTED: Gossypium arboreum F-box protein At5g39250 (LOC108454620), transcript variant X1, mRNA | F-box protein At5g39250(LOC108454620) | coding protein | psRNATarget | |||||||||
| XM_017753144.1 |
|
2.5 | PREDICTED: Gossypium arboreum F-box protein At5g39250 (LOC108454620), transcript variant X2, mRNA | F-box protein At5g39250(LOC108454620) | coding protein | psRNATarget |