ncRNA ID | novel_gar_miR1486 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:9630728-9630789 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180719 |
Length | 24 |
Mature sequence(if miRNA) | 39 - GGAAAUUAUUUUUGAGAUUGAGGA - 62 |
Stem-loop(if miRNA) |
---  -AA   A      A       GAAA   C    GG   AUU UUUUUG GAUUGAG    UUC A    ||   ||| |||||| |||||||    ||| G    CC   UAA AAGGAC CUAAUUC    AAG C CUU  AUG   -      -       ---A   U |
Stem-loop sequence | GGAAAUUAUUUUUGAGAUUGAGGAAAUUCCAGCUGAAACUUAAUCCAGGAAAAUGUACCUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017754663.1 |
|
2.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108456071 (LOC108456071), mRNA | uncharacterized LOC108456071(LOC108456071) | coding protein | psRNATarget |