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BaseInfo

ncRNA ID	novel_gar_miR1483
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr9:63112594-63112786 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180719
Length	24
Mature sequence(if miRNA)	170 - AAAGGGAUACAGAUGACGUGGCAU - 193
Stem-loop(if miRNA)	--                                                                              ----  UU    U    UA   GCCACGUCAUCUGUAUCCCUUUCCAAUAGUUUUAUGCCACAUCAUUACUCUUAUCCUGAAUUUCAGGAUUUUAUCCUG    AA  UCAG AUUU  A   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||  |||| ||||   CGGUGCAGUAGACAUAGGGAAAGGUUAUCAAAAUACGGUGUAGUAAUGAGAAUAGGACUUAAAGUCCUAAAAUAGGAC    UU  AGUU UAGG  U UA                                                                              CUUU  UU    -    UU
Stem-loop sequence	GCCACGUCAUCUGUAUCCCUUUCCAAUAGUUUUAUGCCACAUCAUUACUCUUAUCCUGAAUUUCAGGAUUUUAUCCUGAAUUUCAGUAUUUUAAUUUGGAUUUGAUUUUUUUCCAGGAUAAAAUCCUGAAAUUCAGGAUAAGAGUAAUGAUGUGGCAUAAAACUAUUGGAAAGGGAUACAGAUGACGUGGCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017758885.1	ncRNA:24   UACGGUGCAGUAGACAUAGGGAAA   1   |*|||||||||||||||||||||| targets:1363   ACGCCACGUCAUCUGUAUCCCUUU   1386 Target Full Sequence	0.0	PREDICTED: Gossypium arboreum enolase-like (LOC108459500), mRNA	enolase-like(LOC108459500)	coding protein	psRNATarget
XM_017758885.1	ncRNA:24   UACGGUGCAGUAGACAUAGGGAAA   1   |*|||||||||||||||||||||| targets:1632   ACGCCACGUCAUCUGUAUCCCUUU   1655 Target Full Sequence	0.0	PREDICTED: Gossypium arboreum enolase-like (LOC108459500), mRNA	enolase-like(LOC108459500)	coding protein	psRNATarget
XM_017759563.1	ncRNA:24   UACGGUGCAGUAGACAUAGGGAAA   1   |*|||||||||||||||||||||| targets:2364   ACGCCACGUCAUCUGUAUCCCUUU   2387 Target Full Sequence	0.0	PREDICTED: Gossypium arboreum L-type lectin-domain containing receptor kinase IX.1-like (LOC108460187), mRNA	L-type lectin-domain containing receptor kinase IX.1-like(LOC108460187)	coding protein	psRNATarget
XM_017756176.1	ncRNA:24   UACGGUGCAGUAGACAUAGGGAAA   1   |*|=|||||||||||||||||||| targets:669   ACGUCACGUCAUCUGUAUCCCUUU   692 Target Full Sequence	0.0	PREDICTED: Gossypium arboreum uncharacterized LOC108457229 (LOC108457229), mRNA	uncharacterized LOC108457229(LOC108457229)	coding protein	psRNATarget