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BaseInfo

ncRNA ID	ath-miRf11089-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CAAACGCAGCGUUUGCGGUU - NA
Stem-loop(if miRNA)	A       A     -         UU  -------U    - UUGUUAGCGAUUAACAUCAAUCAUAGAAACC CUACC CCCGCAA CGCAG CGUUUGCGG  GG        AGCG G                               G ||||| ||||||| ||||| |||||||||  ||        |||| |                               C GAUGG GGGCGUU GCGUU GCGAACGCC  UC        CUUU G                               U      C       G     U         CU  CUCGAAAA    U ACCGCUAAAGCUCGCCAAAUUUCGCUAUAGA
Stem-loop sequence	CUACCACCCGCAAACGCAGCGUUUGCGGUUGGUAGCGGUUGUUAGCGAUUAACAUCAAUCAUAGAAACCGCUAGAUAUCGCUUUAAACCGCUCGAAAUCGCCAGUUUUCAAAAGCUCCUUCCCGCAAGCGUUUGCGGUUGCGGGCGGUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY464593.1	ncRNA:20   UUGGCGUUUGCGACGCAAAC   1   ||*||||||=|||||||||| targets:1196   AAACGCAAAUGCUGCGUUUG   1215 Target Full Sequence	2.5	Arabidopsis thaliana At2g34920 mRNA, partial sequence	NA	coding protein	psRNATarget
NM_001336534.1	ncRNA:20   UUGGCGUUUGCGACGCAAAC   1   ||*||||||=|||||||||| targets:2264   AAACGCAAAUGCUGCGUUUG   2283 Target Full Sequence	2.5	Arabidopsis thaliana RING/U-box superfamily protein (EDA18), partial mRNA	RING/U-box superfamily protein(EDA18)	coding protein	psRNATarget
NM_129045.2	ncRNA:20   UUGGCGUUUGCGACGCAAAC   1   ||*||||||=|||||||||| targets:2123   AAACGCAAAUGCUGCGUUUG   2142 Target Full Sequence	2.5	Arabidopsis thaliana RING/U-box superfamily protein (EDA18), mRNA	RING/U-box superfamily protein(EDA18)	coding protein	psRNATarget
NM_001203342.1	ncRNA:20   UUGGCGUUUGCGACGCAAAC   1   |*||||||||||*||||||| targets:1559   ACCCGCAAACGCAGCGUUUG   1578 Target Full Sequence	2.5	Arabidopsis thaliana Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TPPI), partial mRNA	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(TPPI)	coding protein	psRNATarget
BX830531.1	ncRNA:20   UUGGCGUUUGCGACGCAAAC   1   |*||*=|||||||||||||| targets:282   AUCCAUAAACGCUGCGUUUG   301 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZC06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget