| ncRNA ID | novel_gar_miR1478 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr11:22766635-22766679 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180719 |
| Length | 19 |
| Mature sequence(if miRNA) | 27 - UCAUACAAGGCUGAGACAC - 45 |
| Stem-loop(if miRNA) |
-- A U AU UCAUACA GGC GAGACAC G ||||||| ||| ||||||| AGUGUGU CCG CUCUGUG G AA - U CU |
| Stem-loop sequence | UCAUACAAGGCUGAGACACAUGGUCGUGUCUCUGCCUGUGUGAAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017769385.1 |
|
2.5 | PREDICTED: Gossypium arboreum serine/threonine-protein phosphatase 7 long form homolog (LOC108468478), transcript variant X1, mRNA | serine/threonine-protein phosphatase 7 long form homolog(LOC108468478) | coding protein | psRNATarget | |||||||||
| XM_017769441.1 |
|
2.5 | PREDICTED: Gossypium arboreum serine/threonine-protein phosphatase 7 long form homolog (LOC108468478), transcript variant X2, mRNA | serine/threonine-protein phosphatase 7 long form homolog(LOC108468478) | coding protein | psRNATarget |