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BaseInfo

ncRNA ID ath-miRf11087-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UUGUGAAGAAAGGGUUCUUA - NA
Stem-loop(if miRNA)                                 A     AAAUAU
CUAAGAUUUGUGAAGAAAGGGUUCUUAUAUAA AGCUU      A
|||||||||||||||||||||||||||||||| |||||
GAUUCUAAACAUUUUUUUCCCGAGAAUAUAUU UCGAA      A
                                C     AAUCCG
Stem-loop sequence CUAAGAUUUGUGAAGAAAGGGUUCUUAUAUAAAAGCUUAAAUAUAAGCCUAAAAGCUCUUAUAUAAGAGCCCUUUUUUUACAAAUCUUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001345074.1
ncRNA:20   AUUCUUGGGAAAGAAGUGUU   1
  *||||||||||||||||=||
targets:1697   CAAGAACCCUUUCUUCAUAA   1716

1.5 Arabidopsis thaliana Cysteine/Histidine-rich C1 domain family protein mRNA Cysteine/Histidine-rich C1 domain family protein(AT5G54020) coding protein psRNATarget
NM_124781.2
ncRNA:20   AUUCUUGGGAAAGAAGUGUU   1
  *||||||||||||||||=||
targets:1687   CAAGAACCCUUUCUUCAUAA   1706

1.5 Arabidopsis thaliana Cysteine/Histidine-rich C1 domain family protein mRNA Cysteine/Histidine-rich C1 domain family protein(AT5G54020) coding protein psRNATarget